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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs4444551 chr2:101085714 G/A LOC285359 chr3:101431278-101432259:+ 0.36 6.8 3.14E-11 Box Plot
THCA rs4445128 chr7:33092488 G/C FKBP9L chr7:55748767-55780945:- 0.41 9.24 7.92E-19 Box Plot
THCA rs4446513 chr5:49453297 G/A LOC647121 chr1:121260910-121313686:+ -0.35 -7.63 1.3E-13 Box Plot
THCA rs4448232 chr8:11231354 G/T SGK223 chr8:8175258-8244008:- -0.46 -8.81 2.33E-17 Box Plot
THCA rs4449265 chr3:125779652 A/G ROPN1 chr3:123687368-123711025:- 0.33 5.92 6.25E-9 Box Plot
THCA rs4450758 chr3:125686761 T/A ROPN1 chr3:123687368-123711025:- -0.39 -7.1 4.51E-12 Box Plot
THCA rs4451268 chr8:11034859 A/G SGK223 chr8:8175258-8244008:- 0.44 8.06 5.95E-15 Box Plot
THCA rs4452638 chr6:27229265 A/G ZFP57 chr6:29640169-29648887:- -0.64 -6.97 1.05E-11 Box Plot
THCA rs4452832 chr8:10320554 G/C SGK223 chr8:8175258-8244008:- 0.41 7.55 2.3E-13 Box Plot
THCA rs4454197 chr7:33111279 C/T FKBP9L chr7:55748767-55780945:- 0.39 9.16 1.49E-18 Box Plot
THCA rs4455564 chr5:45789024 C/T LOC647121 chr1:121260910-121313686:+ -0.39 -8.11 4.25E-15 Box Plot
THCA rs4455566 chr5:45752862 T/C LOC647121 chr1:121260910-121313686:+ 0.38 8.02 8.3E-15 Box Plot
THCA rs4455568 chr5:46079857 T/C LOC647121 chr1:121260910-121313686:+ 0.35 7.58 1.75E-13 Box Plot
THCA rs4455569 chr5:46081884 C/A LOC647121 chr1:121260910-121313686:+ -0.35 -7.46 4.13E-13 Box Plot
THCA rs4457208 chr7:66372821 A/G CCT6P1 chr7:65216129-65228341:+ 0.43 6.75 4.26E-11 Box Plot